EnhancerDB
  1. Home
  2. SNP
  3. rs139494227[chr1:23955186]
Enhancers that have rs139494227[chr1:23955186]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139494227[chr1:23955186]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23955170 23955186 POU4F2 JASPAR yes 27450109
chr1 23955170 23955186 POU4F3 JASPAR yes 27450110
chr1 23955172 23955186 POU4F1 JASPAR yes 27450111
chr1 23955176 23955191 HNF1A JASPAR yes 27450113
chr1 23955177 23955191 ONECUT3 JASPAR yes 27450114
chr1 23955180 23955196 POU4F3 JASPAR yes 27450115
chr1 23955181 23955197 POU4F2 JASPAR yes 27450116
chr1 23955181 23955197 POU4F3 JASPAR yes 27450117
chr1 23955183 23955187 YY1 TRANSFAC yes 27450118
chr1 23955183 23955197 POU4F1 JASPAR yes 27450119
chr1 23955185 23955197 MEF2A JASPAR yes 27450120
chr1 23955185 23955197 MEF2B JASPAR yes 27450121
chr1 23955185 23955197 MEF2D JASPAR yes 27450122
Genes associated with rs139494227[chr1:23955186], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More