EnhancerDB
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  3. rs139517824[chr3:55556224]
Enhancers that have rs139517824[chr3:55556224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 55550085 55563675 enh35414
Prostate (PC-3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139517824[chr3:55556224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 55556217 55556228 EBF1 JASPAR yes 2521295
chr3 55556222 55556232 SP1 JASPAR yes 2521296
chr3 55556223 55556232 SP1 TRANSFAC yes 2521297
chr3 55556223 55556233 SP1 JASPAR yes 2521298
chr3 55556224 55556233 SP1 TRANSFAC yes 2521299
Genes associated with rs139517824[chr3:55556224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More