EnhancerDB
  1. Home
  2. SNP
  3. rs139530016[chr17:76946567]
Enhancers that have rs139530016[chr17:76946567]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs139530016[chr17:76946567]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76945921 76950302 TCF7L2 GTRD no Colon (HCT116) 21795495
chr17 76945928 76946800 TCF7L2 GTRD no Colon (HCT116) 21795496
chr17 76945995 76947598 TCF7L2 GTRD no Colon (HCT116) 21795497
chr17 76946008 76950730 TCF7L2 GTRD no Colon (HCT116) 21795498
chr17 76946067 76946699 TCF7L2 GTRD no Colon (HCT116) 21795499
chr17 76946560 76946574 EBF1 JASPAR yes 56192531
chr17 76946562 76946573 EBF1 JASPAR yes 56192532
Genes associated with rs139530016[chr17:76946567], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More