EnhancerDB
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  3. rs139543839[chr1:118195277]
Enhancers that have rs139543839[chr1:118195277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs139543839[chr1:118195277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118195207 118195576 ZNF143 GTRD no Epithelial (MCF-7) 21334551
chr1 118195263 118195277 PLAG1 JASPAR yes 31889399
chr1 118195264 118195279 TFAP2A JASPAR yes 31889400
chr1 118195264 118195279 TFAP2C JASPAR yes 31889401
Genes associated with rs139543839[chr1:118195277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More