EnhancerDB
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  3. rs139555542[chr1:12206853]
Enhancers that have rs139555542[chr1:12206853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs139555542[chr1:12206853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12206846 12206860 ATF7 JASPAR yes 26803216
chr1 12206846 12206860 BATF3 JASPAR yes 26803217
chr1 12206847 12206859 JDP2 JASPAR yes 26803218
chr1 12206847 12206860 ATF4 JASPAR yes 26803219
chr1 12206847 12206862 JUND JASPAR yes 26803220
chr1 12206848 12206861 JUN JASPAR yes 26803221
chr1 12206849 12206857 CREB1 JASPAR yes 26803222
chr1 12206850 12206862 CREB1 JASPAR yes 26803223
chr1 12206853 12206864 NRL JASPAR yes 26803224
Genes associated with rs139555542[chr1:12206853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More