EnhancerDB
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  3. rs139565250[chr17:53507867]
Enhancers that have rs139565250[chr17:53507867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139565250[chr17:53507867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53507867 53507879 IRF1 JASPAR yes 54849199
chr17 53507867 53507882 FOXP1 JASPAR yes 54849200
chr17 53507867 53507888 IRF1 JASPAR yes 54849201
Genes associated with rs139565250[chr17:53507867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More