EnhancerDB
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  3. rs139571402[chr1:10954855]
Enhancers that have rs139571402[chr1:10954855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139571402[chr1:10954855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10954842 10954857 FOXA1 JASPAR yes 26757791
chr1 10954843 10954855 FOXI1 JASPAR yes 26757792
chr1 10954844 10954856 FOXC2 JASPAR yes 26757793
chr1 10954844 10954858 FOXF2 JASPAR yes 26757794
chr1 10954845 10954856 FOXB1 JASPAR yes 26757795
chr1 10954845 10954856 FOXC1 JASPAR yes 26757796
chr1 10954846 10954857 FOXA1 JASPAR yes 26757798
Genes associated with rs139571402[chr1:10954855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More