EnhancerDB
  1. Home
  2. SNP
  3. rs139649559[chr2:39318970]
Enhancers that have rs139649559[chr2:39318970]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139649559[chr2:39318970]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39318958 39318976 ESR1 JASPAR yes 73180579
chr2 39318960 39318981 IRF1 JASPAR yes 73180580
chr2 39318962 39318977 STAT2 JASPAR yes 73180581
chr2 39318963 39318973 ETV6 JASPAR yes 73180582
chr2 39318963 39318977 SPI1 JASPAR yes 73180583
chr2 39318963 39318977 STAT1 JASPAR yes 73180584
chr2 39318964 39318978 IRF7 JASPAR yes 73180585
chr2 39318964 39318978 IRF8 JASPAR yes 73180586
chr2 39318968 39318989 ZNF263 JASPAR yes 73180587
Genes associated with rs139649559[chr2:39318970], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More