EnhancerDB
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  3. rs139706054[chr15:57623008]
Enhancers that have rs139706054[chr15:57623008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 57611005 57635135 enh3617
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs139706054[chr15:57623008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 57622842 57623218 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21655108
chr15 57622846 57623166 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21655109
chr15 57622907 57623251 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21655110
chr15 57622966 57623069 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21655111
chr15 57623005 57623014 HIC2 JASPAR yes 23604857
chr15 57623008 57623012 LFA1 TRANSFAC yes 23604858
Genes associated with rs139706054[chr15:57623008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More