EnhancerDB
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  3. rs139721392[chr1:202020114]
Enhancers that have rs139721392[chr1:202020114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs139721392[chr1:202020114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202014763 202020119 ZBTB33 GTRD no Lung (A549) 107857531
chr1 202014791 202021226 ZBTB33 GTRD no Lung (A549) 107857532
chr1 202016939 202020131 ZNF143 GTRD no Epithelial (MCF-7) 21365823
chr1 202017009 202020324 ZNF143 GTRD no Epithelial (MCF-7) 21365825
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365826
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365827
chr1 202017151 202020275 ZNF143 GTRD no Epithelial (MCF-7) 21365830
chr1 202017169 202020675 ZNF143 GTRD no Epithelial (MCF-7) 21365833
chr1 202017270 202020252 ZNF143 GTRD no Epithelial (MCF-7) 21365843
chr1 202017419 202020296 TCF7L2 GTRD no Colon (HCT116) 21365851
chr1 202017656 202020495 ZNF274 GTRD no Cervix (HeLa-S3) 21365865
chr1 202020100 202020119 PAX5 JASPAR yes 34546861
Genes associated with rs139721392[chr1:202020114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More