EnhancerDB
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  3. rs139724156[chr5:95972885]
Enhancers that have rs139724156[chr5:95972885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 95960609 95996255 enh22445
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs139724156[chr5:95972885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 95972875 95972885 HOXA13 JASPAR yes 64459104
chr5 95972875 95972885 HOXB13 JASPAR yes 64459105
chr5 95972875 95972885 HOXC10 JASPAR yes 64459106
chr5 95972875 95972885 HOXD13 JASPAR yes 64459107
chr5 95972875 95972886 HOXA10 JASPAR yes 64459108
chr5 95972876 95972885 CDX1 JASPAR yes 64459109
chr5 95972876 95972886 MNX1 JASPAR yes 64459110
chr5 95972876 95972887 CDX2 JASPAR yes 64459111
chr5 95972883 95972898 FOXA1 JASPAR yes 64459112
chr5 95972885 95972897 FOXC2 JASPAR yes 64459113
Genes associated with rs139724156[chr5:95972885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More