EnhancerDB
  1. Home
  2. SNP
  3. rs139741242[chr1:212925944]
Enhancers that have rs139741242[chr1:212925944]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212921265 212930417 enh914
Liver (HepG2) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs139741242[chr1:212925944]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212925636 212926042 TEF1 GTRD no Bone (Osteoblast) 107869355
chr1 212925892 212926482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379201
chr1 212925892 212926482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869356
chr1 212925912 212926432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379202
chr1 212925912 212926432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869357
chr1 212925941 212925949 OTX2 JASPAR yes 35150800
Genes associated with rs139741242[chr1:212925944], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More