EnhancerDB
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  3. rs139795190[chr3:122795372]
Enhancers that have rs139795190[chr3:122795372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 122787441 122806978 enh54329
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs139795190[chr3:122795372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 122795365 122795375 HOXC10 JASPAR yes 5299842
chr3 122795365 122795375 HOXD11 JASPAR yes 5299843
chr3 122795365 122795375 HOXD13 JASPAR yes 5299844
chr3 122795365 122795376 HOXA10 JASPAR yes 5299845
chr3 122795365 122795376 HOXC11 JASPAR yes 5299846
chr3 122795365 122795376 HOXC12 JASPAR yes 5299847
chr3 122795365 122795376 HOXD12 JASPAR yes 5299848
chr3 122795366 122795375 CDX1 JASPAR yes 5299849
chr3 122795366 122795377 CDX2 JASPAR yes 5299850
chr3 122795371 122795381 SMAD3 JASPAR yes 5299851
Genes associated with rs139795190[chr3:122795372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More