EnhancerDB
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  3. rs139797276[chr2:39324984]
Enhancers that have rs139797276[chr2:39324984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139797276[chr2:39324984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39324970 39324989 PITX2 TRANSFAC yes 73181581
chr2 39324976 39324989 ZBTB18 JASPAR yes 73181582
chr2 39324977 39324989 PKNOX1 JASPAR yes 73181583
chr2 39324977 39324989 TGIF1 JASPAR yes 73181584
chr2 39324978 39324987 SNAI2 JASPAR yes 73181585
chr2 39324978 39324988 FIGLA JASPAR yes 73181586
chr2 39324978 39324988 ID4 JASPAR yes 73181587
chr2 39324978 39324988 TCF3 JASPAR yes 73181588
chr2 39324978 39324988 TCF4 JASPAR yes 73181589
chr2 39324980 39324989 ZEB1 JASPAR yes 73181590
chr2 39324980 39324990 TBX21 JASPAR yes 73181591
chr2 39324981 39324989 MGA JASPAR yes 73181592
chr2 39324981 39324989 TBX15 JASPAR yes 73181593
chr2 39324981 39324989 TBX1 JASPAR yes 73181594
chr2 39324981 39324989 TBX4 JASPAR yes 73181595
chr2 39324981 39324989 TBX5 JASPAR yes 73181596
chr2 39324981 39324991 TBR1 JASPAR yes 73181597
chr2 39324981 39324994 SMAD2 JASPAR yes 73181598
Genes associated with rs139797276[chr2:39324984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More