EnhancerDB
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Enhancers that have rs139841727[chr12:106682658]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106671985 106687355 enh29961
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Lung (PC-9) Pancreas (Panc1) Heart
Transcript factors that have rs139841727[chr12:106682658]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106682077 106682693 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21570252
chr12 106682077 106682693 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108056037
chr12 106682097 106682667 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21570253
chr12 106682097 106682667 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108056038
chr12 106682225 106683426 ZNF143 GTRD no Epithelial (MCF-7) 21570264
chr12 106682225 106683426 ZNF143 GTRD no Epithelial (MCF-7) 108056054
chr12 106682294 106683336 ZNF143 GTRD no Epithelial (MCF-7) 21570278
chr12 106682294 106683336 ZNF143 GTRD no Epithelial (MCF-7) 108056082
chr12 106682397 106682773 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21570280
chr12 106682397 106682773 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108056085
chr12 106682402 106682806 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21570281
chr12 106682402 106682806 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108056086
chr12 106682433 106682829 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21570282
chr12 106682433 106682829 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108056087
chr12 106682487 106683505 ZBTB33 GTRD no Lung (A549) 108056088
chr12 106682492 106683445 ZNF274 GTRD no Blood (GM12878) 108056089
chr12 106682495 106682713 SOX2 GTRD no Neural Stem Cells (H9) 108056090
chr12 106682496 106683362 ZNF143 GTRD no Epithelial (MCF-7) 21570283
chr12 106682496 106683362 ZNF143 GTRD no Epithelial (MCF-7) 108056091
Genes associated with rs139841727[chr12:106682658], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More