EnhancerDB
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Enhancers that have rs139860531[chr17:76929983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139860531[chr17:76929983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76929421 76930071 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795359
chr17 76929421 76930071 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108304355
chr17 76929421 76930071 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108304356
chr17 76929453 76929989 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108304361
chr17 76929526 76930036 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795374
chr17 76929526 76930036 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108304373
chr17 76929695 76930231 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108304394
chr17 76929695 76930231 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108304395
chr17 76929948 76930212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795388
chr17 76929948 76930212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108304396
chr17 76929958 76930478 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108304397
chr17 76929972 76929984 NHLH1 JASPAR yes 56190130
chr17 76929973 76929983 ID4 JASPAR yes 56190131
chr17 76929973 76929983 NHLH1 JASPAR yes 56190132
chr17 76929973 76929983 TCF3 JASPAR yes 56190133
chr17 76929973 76929983 TCF4 JASPAR yes 56190134
chr17 76929974 76929983 SNAI2 JASPAR yes 56190135
Genes associated with rs139860531[chr17:76929983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More