EnhancerDB
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  3. rs139877357[chr1:203299056]
Enhancers that have rs139877357[chr1:203299056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139877357[chr1:203299056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203298530 203301729 ZNF274 GTRD no Blood (GM12878) 21368789
chr1 203298563 203299827 STAT3 GTRD no Blood (OCI-LY7) 21368790
chr1 203298574 203299844 ZNF274 GTRD no Blood (GM12878) 21368791
chr1 203298585 203301799 ZNF274 GTRD no Blood (GM12878) 21368792
chr1 203298663 203299856 ZNF274 GTRD no Blood (GM12878) 21368793
chr1 203298673 203299852 ZNF274 GTRD no Blood (GM12878) 21368794
chr1 203298675 203301852 ZNF274 GTRD no Blood (GM12878) 21368795
chr1 203298965 203301347 ZNF274 GTRD no Blood (GM12878) 21368796
chr1 203299048 203299059 CDX2 JASPAR yes 34618650
chr1 203299049 203299060 HOXA10 JASPAR yes 34618651
chr1 203299050 203299059 CDX1 JASPAR yes 34618652
chr1 203299050 203299060 HOXA13 JASPAR yes 34618653
chr1 203299050 203299060 HOXB13 JASPAR yes 34618654
chr1 203299050 203299060 HOXD13 JASPAR yes 34618655
chr1 203299050 203299723 ZNF274 GTRD no Blood (GM12878) 21368797
Genes associated with rs139877357[chr1:203299056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More