EnhancerDB
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  3. rs139878619[chr1:3229880]
Enhancers that have rs139878619[chr1:3229880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 3229711 3230157 vista97
VISTA
Transcript factors that have rs139878619[chr1:3229880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3228990 3229910 ZNF274 GTRD no Liver (HepG2) 107801845
chr1 3229875 3229889 JUN JASPAR yes 26278379
chr1 3229875 3229889 JUN JASPAR yes 118217934
chr1 3229878 3229889 FOSL2 JASPAR yes 26278380
chr1 3229878 3229889 JUNB JASPAR yes 26278381
chr1 3229878 3229889 FOSL2 JASPAR yes 118217935
chr1 3229878 3229889 JUNB JASPAR yes 118217936
chr1 3229879 3229890 FOS JASPAR yes 26278382
chr1 3229879 3229890 FOSL1 JASPAR yes 26278383
chr1 3229879 3229890 JUND JASPAR yes 26278384
chr1 3229879 3229890 FOS JASPAR yes 118217937
chr1 3229879 3229890 FOSL1 JASPAR yes 118217938
chr1 3229879 3229890 JUND JASPAR yes 118217939
Genes associated with rs139878619[chr1:3229880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More