EnhancerDB
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  3. rs139894550[chr16:373577]
Enhancers that have rs139894550[chr16:373577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs139894550[chr16:373577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 21683785
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170125
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170126
chr16 373563 373581 RARA JASPAR yes 9104406
chr16 373570 373585 LEF1 JASPAR yes 9104408
Genes associated with rs139894550[chr16:373577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More