EnhancerDB
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  3. rs139915981[chr1:10954241]
Enhancers that have rs139915981[chr1:10954241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139915981[chr1:10954241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10954221 10954241 RREB1 JASPAR yes 26757661
chr1 10954225 10954245 RREB1 JASPAR yes 26757663
chr1 10954227 10954242 FOXA1 JASPAR yes 26757664
chr1 10954228 10954243 FOXP1 JASPAR yes 26757666
chr1 10954229 10954241 FOXC2 JASPAR yes 26757667
chr1 10954231 10954242 FOXA1 JASPAR yes 26757668
chr1 10954232 10954247 FOXP1 JASPAR yes 26757669
chr1 10954233 10954244 FOXP2 JASPAR yes 26757670
Genes associated with rs139915981[chr1:10954241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More