EnhancerDB
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  3. rs139916330[chr12:117040084]
Enhancers that have rs139916330[chr12:117040084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139916330[chr12:117040084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117038921 117040555 ZNF274 GTRD no Liver (HepG2) 108061845
chr12 117038921 117040555 ZNF274 GTRD no Liver (HepG2) 108061846
chr12 117039504 117041502 ZNF274 GTRD no Bone Marrow (K562) 21577623
chr12 117039504 117041502 ZNF274 GTRD no Bone Marrow (K562) 108061859
chr12 117039504 117041502 ZNF274 GTRD no Bone Marrow (K562) 108061860
chr12 117039507 117040157 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21577624
chr12 117039507 117040157 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108061861
chr12 117039507 117040157 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108061862
chr12 117039513 117041033 ZNF274 GTRD no Bone Marrow (K562) 21577625
chr12 117039513 117041033 ZNF274 GTRD no Bone Marrow (K562) 108061863
chr12 117039513 117041033 ZNF274 GTRD no Bone Marrow (K562) 108061864
chr12 117039756 117040297 TCF7L2 GTRD no Colon (HCT116) 21577627
chr12 117039756 117040297 TCF7L2 GTRD no Colon (HCT116) 108061867
chr12 117039948 117040520 ZNF274 GTRD no Blood (GM12878) 108061871
chr12 117039961 117040583 ZNF274 GTRD no Bone Marrow (K562) 21577630
chr12 117039961 117040583 ZNF274 GTRD no Bone Marrow (K562) 108061872
chr12 117040070 117040766 ZBTB33 GTRD no Lung (A549) 21577631
chr12 117040076 117040085 SRY JASPAR yes 124013809
chr12 117040080 117040086 SOX10 JASPAR yes 124013810
Genes associated with rs139916330[chr12:117040084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More