EnhancerDB
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Enhancers that have rs139920619[chr1:201571459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs139920619[chr1:201571459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201570153 201579304 ZNF274 GTRD no Bone Marrow (K562) 107856725
chr1 201570574 201572261 ZNF274 GTRD no Bone Marrow (K562) 107856726
chr1 201570584 201571549 ZNF143 GTRD no Epithelial (MCF-7) 21365170
chr1 201570602 201571462 ZNF143 GTRD no Epithelial (MCF-7) 21365171
chr1 201571451 201571472 IRF1 JASPAR yes 34511944
chr1 201571455 201571469 IRF7 JASPAR yes 34511945
chr1 201571456 201571476 RREB1 JASPAR yes 34511946
chr1 201571456 201571477 IRF1 JASPAR yes 34511947
chr1 201571457 201571463 TCF4 TRANSFAC yes 34511948
chr1 201571457 201571472 FOXP1 JASPAR yes 34511949
chr1 201571457 201571478 IRF1 JASPAR yes 34511950
chr1 201571458 201571473 STAT2 JASPAR yes 34511951
Genes associated with rs139920619[chr1:201571459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More