EnhancerDB
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  3. rs139936220[chr17:70424968]
Enhancers that have rs139936220[chr17:70424968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs139936220[chr17:70424968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70424742 70425361 ZNF274 GTRD no Blood (GM12878) 21785146
chr17 70424762 70425479 ZNF274 GTRD no Blood (GM12878) 21785147
chr17 70424781 70425520 ZNF274 GTRD no Blood (GM12878) 21785148
chr17 70424963 70424974 FOXA1 JASPAR yes 55787251
chr17 70424963 70424974 FOXH1 JASPAR yes 55787252
chr17 70424965 70424977 FOXI1 JASPAR yes 55787253
chr17 70424967 70424975 FOXG1 JASPAR yes 55787254
Genes associated with rs139936220[chr17:70424968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More