EnhancerDB
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  3. rs139945454[chr1:201539617]
Enhancers that have rs139945454[chr1:201539617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201518985 201542475 enh27421
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs139945454[chr1:201539617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201537319 201541087 ZNF143 GTRD no Epithelial (MCF-7) 107856678
chr1 201537506 201540703 ZNF143 GTRD no Epithelial (MCF-7) 107856679
chr1 201537766 201540685 ZNF143 GTRD no Epithelial (MCF-7) 107856680
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 21364780
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 107856681
chr1 201537914 201540604 ZNF143 GTRD no Epithelial (MCF-7) 107856682
chr1 201537930 201540781 ZBTB33 GTRD no Brain (SK-N-SH) 21364782
chr1 201537930 201540781 ZBTB33 GTRD no Brain (SK-N-SH) 107856683
chr1 201537992 201540768 ZBTB33 GTRD no Brain (SK-N-SH) 21364783
chr1 201537992 201540768 ZBTB33 GTRD no Brain (SK-N-SH) 107856684
chr1 201538114 201539722 ZNF274 GTRD no Bone Marrow (K562) 21364786
chr1 201538127 201540586 ZNF143 GTRD no Epithelial (MCF-7) 107856685
chr1 201538188 201540738 ZNF143 GTRD no Epithelial (MCF-7) 107856686
chr1 201538197 201541749 ZNF143 GTRD no Epithelial (MCF-7) 107856687
chr1 201538297 201540648 ZBTB33 GTRD no Brain (SK-N-SH) 21364788
chr1 201538297 201540648 ZBTB33 GTRD no Brain (SK-N-SH) 107856688
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 21364790
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 107856689
chr1 201538504 201540618 ZNF143 GTRD no Epithelial (MCF-7) 107856690
chr1 201538670 201540021 ZNF274 GTRD no Bone Marrow (K562) 21364798
chr1 201539026 201539824 ZNF274 GTRD no Bone Marrow (K562) 21364802
chr1 201539203 201540204 ZNF274 GTRD no Bone Marrow (K562) 21364803
chr1 201539279 201540974 ZNF274 GTRD no Bone Marrow (K562) 21364805
chr1 201539279 201540974 ZNF274 GTRD no Bone Marrow (K562) 107856691
chr1 201539341 201540630 ZBTB33 GTRD no Brain (SK-N-SH) 21364806
chr1 201539341 201540630 ZBTB33 GTRD no Brain (SK-N-SH) 107856692
chr1 201539363 201540561 ZNF274 GTRD no Bone Marrow (K562) 21364807
chr1 201539363 201540561 ZNF274 GTRD no Bone Marrow (K562) 107856693
chr1 201539382 201540063 ZNF274 GTRD no Bone Marrow (K562) 21364808
chr1 201539385 201539859 ZNF274 GTRD no Bone Marrow (K562) 21364809
chr1 201539385 201539932 ZNF274 GTRD no Bone Marrow (K562) 21364810
chr1 201539482 201539863 ZNF274 GTRD no Bone Marrow (K562) 21364811
chr1 201539484 201539957 ZNF274 GTRD no Bone Marrow (K562) 21364812
chr1 201539501 201540863 ZNF274 GTRD no Bone Marrow (K562) 21364813
chr1 201539501 201540863 ZNF274 GTRD no Bone Marrow (K562) 107856694
chr1 201539502 201540897 ZNF274 GTRD no Bone Marrow (K562) 21364814
chr1 201539502 201540897 ZNF274 GTRD no Bone Marrow (K562) 107856695
chr1 201539563 201540651 ZBTB33 GTRD no Brain (SK-N-SH) 21364815
chr1 201539563 201540651 ZBTB33 GTRD no Brain (SK-N-SH) 107856696
chr1 201539614 201540075 MYOD GTRD no Muscle (Myoblast) 21364816
chr1 201539615 201539619 NFE TRANSFAC yes 34508262
Genes associated with rs139945454[chr1:201539617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More