EnhancerDB
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  3. rs139959863[chr17:39826436]
Enhancers that have rs139959863[chr17:39826436]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs139959863[chr17:39826436]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39826434 39826443 ZEB1 JASPAR yes 54271083
chr17 39826434 39826449 SCRT1 JASPAR yes 54271084
chr17 39826435 39826445 ID4 JASPAR yes 54271085
chr17 39826435 39826445 TCF3 JASPAR yes 54271086
chr17 39826435 39826445 TCF4 JASPAR yes 54271087
chr17 39826436 39826445 SNAI2 JASPAR yes 54271088
Genes associated with rs139959863[chr17:39826436], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More