EnhancerDB
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  3. rs139980056[chr12:49597118]
Enhancers that have rs139980056[chr12:49597118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49590445 49597955 enh2325
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Uterus Thymus Heart
Transcript factors that have rs139980056[chr12:49597118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49597102 49597122 TP63 JASPAR yes 120763967
chr12 49597103 49597121 TP73 JASPAR yes 120763968
chr12 49597107 49597128 REST JASPAR yes 120763969
chr12 49597108 49597127 REST JASPAR yes 120763970
chr12 49597113 49597123 SP1 JASPAR yes 120763971
chr12 49597116 49597121 SP1 TRANSFAC yes 120763972
Genes associated with rs139980056[chr12:49597118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More