EnhancerDB
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  3. rs140004088[chr1:52127350]
Enhancers that have rs140004088[chr1:52127350]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52122845 52134475 enh26695
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs140004088[chr1:52127350]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52127341 52127355 ONECUT3 JASPAR yes 28860659
chr1 52127341 52127356 SOX21 JASPAR yes 28860660
chr1 52127349 52127353 YY1 TRANSFAC yes 28860661
chr1 52127349 52127364 RUNX2 JASPAR yes 28860662
chr1 52127349 52127366 ZNF410 JASPAR yes 28860663
Genes associated with rs140004088[chr1:52127350], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More