EnhancerDB
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  3. rs140161743[chr12:46549462]
Enhancers that have rs140161743[chr12:46549462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs140161743[chr12:46549462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46546181 46550702 ZNF274 GTRD no Cervix (HeLa-S3) 21540604
chr12 46549107 46549522 TCF7L2 GTRD no Colon (HCT116) 21540667
chr12 46549120 46549723 TCF7L2 GTRD no Colon (HCT116) 21540668
chr12 46549206 46550411 AR GTRD no Prostate (PC-3) 21540669
chr12 46549242 46550958 ZNF274 GTRD no Cervix (HeLa-S3) 21540670
chr12 46549399 46550814 ZBTB33 GTRD no Lung (A549) 21540671
chr12 46549402 46550594 ZNF274 GTRD no Cervix (HeLa-S3) 21540672
chr12 46549408 46550774 ZBTB33 GTRD no Lung (A549) 21540673
chr12 46549427 46551942 ZNF274 GTRD no Cervix (HeLa-S3) 21540674
chr12 46549443 46550338 ZNF274 GTRD no Cervix (HeLa-S3) 21540675
chr12 46549443 46552644 ZNF274 GTRD no Cervix (HeLa-S3) 21540676
chr12 46549452 46551820 ZNF274 GTRD no Cervix (HeLa-S3) 21540677
chr12 46549456 46549466 BARHL2 JASPAR yes 120599029
chr12 46549458 46549462 YY1 TRANSFAC yes 120599030
chr12 46549461 46549474 DUXA JASPAR yes 120599031
chr12 46549462 46549465 MYB TRANSFAC yes 120599032
chr12 46549462 46549473 DUX4 JASPAR yes 120599033
chr12 46549462 46549473 PHOX2A JASPAR yes 120599034
Genes associated with rs140161743[chr12:46549462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More