EnhancerDB
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  3. rs140176987[chr12:48217639]
Enhancers that have rs140176987[chr12:48217639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48214553 48225280 enh14688
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs140176987[chr12:48217639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48217635 48217642 NKX3-1 JASPAR yes 120719758
chr12 48217638 48217647 PITX3 JASPAR yes 120719759
chr12 48217638 48217648 GSC2 JASPAR yes 120719760
chr12 48217638 48217648 GSC JASPAR yes 120719761
chr12 48217639 48217647 OTX1 JASPAR yes 120719762
chr12 48217639 48217647 OTX2 JASPAR yes 120719763
chr12 48217639 48217647 RHOXF1 JASPAR yes 120719764
chr12 48217639 48217659 TP53 JASPAR yes 120719765
Genes associated with rs140176987[chr12:48217639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More