EnhancerDB
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  3. rs140205828[chr1:207565340]
Enhancers that have rs140205828[chr1:207565340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207561205 207573294 enh27443
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs140205828[chr1:207565340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207565185 207565945 ZNF143 GTRD no Epithelial (MCF-7) 21373772
chr1 207565220 207565985 ZNF143 GTRD no Epithelial (MCF-7) 21373773
chr1 207565244 207565996 ZNF143 GTRD no Epithelial (MCF-7) 21373774
chr1 207565247 207566200 ZNF143 GTRD no Epithelial (MCF-7) 21373775
chr1 207565249 207566120 ZNF143 GTRD no Epithelial (MCF-7) 21373776
chr1 207565297 207565748 ZNF143 GTRD no Epithelial (MCF-7) 21373777
chr1 207565306 207565847 ZNF143 GTRD no Epithelial (MCF-7) 21373778
chr1 207565330 207565345 FOXA1 JASPAR yes 34860159
chr1 207565331 207565342 FOXB1 JASPAR yes 34860160
Genes associated with rs140205828[chr1:207565340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More