EnhancerDB
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  3. rs140210293[chr15:70551201]
Enhancers that have rs140210293[chr15:70551201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 70547505 70567650 enh3699
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr15 70551051 70551280 vista20554
VISTA
Transcript factors that have rs140210293[chr15:70551201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 70550848 70551444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152989
chr15 70550848 70551444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152990
chr15 70550895 70551415 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152991
chr15 70550973 70551293 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152992
chr15 70550992 70551321 RUNX3 UCSC Txn Factor no Conserved 108152993
chr15 70550992 70551321 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152994
chr15 70551026 70551306 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152995
chr15 70551043 70551347 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152996
chr15 70551076 70551296 EBF1 UCSC Txn Factor no Conserved 108152997
chr15 70551076 70551296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152998
chr15 70551085 70551252 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108152999
chr15 70551089 70551231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108153000
chr15 70551139 70551429 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108153001
chr15 70551196 70551201 SP1 TRANSFAC yes 24419813
chr15 70551196 70551201 SP1 TRANSFAC yes 70552830
chr15 70551198 70551211 TFAP2A JASPAR yes 24419814
chr15 70551198 70551211 TFAP2B JASPAR yes 24419815
chr15 70551198 70551211 TFAP2C JASPAR yes 24419816
chr15 70551198 70551211 TFAP2A JASPAR yes 70552831
chr15 70551198 70551211 TFAP2B JASPAR yes 70552832
chr15 70551198 70551211 TFAP2C JASPAR yes 70552833
Genes associated with rs140210293[chr15:70551201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 71123863 71146498 - LARP6 ENSG00000166173.9 71146498 572662 Heart 0.383183 14074