EnhancerDB
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Enhancers that have rs140252873[chr17:71338567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71332212 71342792 enh17362
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs140252873[chr17:71338567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71337942 71339877 ZBTB33 GTRD no Brain (SK-N-SH) 108291246
chr17 71337942 71339877 ZBTB33 GTRD no Brain (SK-N-SH) 108291247
chr17 71338130 71339009 ZBTB33 GTRD no Brain (SK-N-SH) 108291249
chr17 71338158 71338648 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291250
chr17 71338158 71338698 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108291251
chr17 71338164 71339009 ZBTB33 GTRD no Brain (SK-N-SH) 108291252
chr17 71338166 71338746 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291253
chr17 71338190 71338790 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291254
chr17 71338201 71339026 ZBTB33 GTRD no Brain (SK-N-SH) 108291255
chr17 71338206 71338656 MYOD GTRD no Muscle (Myoblast) 108291256
chr17 71338234 71338800 ZBTB33 GTRD no Brain (SK-N-SH) 108291258
chr17 71338237 71339091 TEF1 GTRD no Bone (Osteoblast) 21786184
chr17 71338237 71339091 TEF1 GTRD no Bone (Osteoblast) 108291259
chr17 71338247 71338819 ZBTB33 GTRD no Brain (SK-N-SH) 108291261
chr17 71338277 71338597 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291263
chr17 71338282 71338592 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291264
chr17 71338302 71338833 ZBTB33 GTRD no Brain (SK-N-SH) 108291265
chr17 71338303 71338567 CEBPB UCSC Txn Factor no Conserved 108291266
chr17 71338303 71338567 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291267
chr17 71338321 71338571 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291268
chr17 71338327 71338959 ZBTB33 GTRD no Brain (SK-N-SH) 108291269
chr17 71338335 71338957 ZBTB33 GTRD no Brain (SK-N-SH) 108291271
chr17 71338337 71338857 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291272
chr17 71338338 71338593 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291273
chr17 71338342 71338865 ZBTB33 GTRD no Brain (SK-N-SH) 108291274
chr17 71338343 71338828 ZBTB33 GTRD no Brain (SK-N-SH) 108291275
chr17 71338379 71338817 ZBTB33 GTRD no Brain (SK-N-SH) 108291278
chr17 71338384 71338837 ZBTB33 GTRD no Brain (SK-N-SH) 108291279
chr17 71338413 71338835 ZBTB33 GTRD no Brain (SK-N-SH) 108291281
chr17 71338436 71338944 ZBTB33 GTRD no Lung (A549) 108291282
chr17 71338441 71338816 ZBTB33 GTRD no Brain (SK-N-SH) 108291283
chr17 71338504 71338837 ZBTB33 GTRD no Brain (SK-N-SH) 108291284
chr17 71338561 71338570 SNAI2 JASPAR yes 55863595
chr17 71338562 71338567 USF2 TRANSFAC yes 55863596
Genes associated with rs140252873[chr17:71338567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More