EnhancerDB
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  3. rs140270253[chr17:53506026]
Enhancers that have rs140270253[chr17:53506026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs140270253[chr17:53506026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53506019 53506030 RUNX1 JASPAR yes 54848973
chr17 53506020 53506030 RUNX3 JASPAR yes 54848974
chr17 53506025 53506029 ESR1 TRANSFAC yes 54848975
Genes associated with rs140270253[chr17:53506026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More