EnhancerDB
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  3. rs140396191[chr17:80245208]
Enhancers that have rs140396191[chr17:80245208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs140396191[chr17:80245208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80244852 80245477 TCF7L2 GTRD no Colon (HCT116) 21798572
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 21798573
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 108311423
chr17 80245019 80245527 ZNF143 GTRD no Epithelial (MCF-7) 21798574
chr17 80245023 80245475 TCF7L2 GTRD no Colon (HCT116) 21798575
chr17 80245035 80245539 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798576
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 21798577
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 108311424
chr17 80245072 80245512 ZNF143 GTRD no Epithelial (MCF-7) 21798578
chr17 80245078 80245256 ZNF274 GTRD no Blood (GM12878) 21798579
chr17 80245115 80245379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798580
chr17 80245188 80245209 REST JASPAR yes 56357982
chr17 80245189 80245208 REST JASPAR yes 56357983
chr17 80245204 80245211 PEA3 TRANSFAC yes 56357984
Genes associated with rs140396191[chr17:80245208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More