EnhancerDB
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  3. rs140428278[chr1:25355557]
Enhancers that have rs140428278[chr1:25355557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
chr1 25355468 25355649 vista822
VISTA
Transcript factors that have rs140428278[chr1:25355557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802491
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802492
chr1 25355056 25358083 ZNF274 GTRD no Bone Marrow (K562) 107802493
chr1 25355544 25355559 ZIC3 JASPAR yes 27555586
chr1 25355544 25355559 ZIC3 JASPAR yes 118252927
chr1 25355551 25355557 SP1 TRANSFAC yes 27555587
chr1 25355551 25355557 SP1 TRANSFAC yes 118252928
chr1 25355552 25355557 SP1 TRANSFAC yes 27555588
chr1 25355552 25355557 SP1 TRANSFAC yes 118252929
Genes associated with rs140428278[chr1:25355557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More