EnhancerDB
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  3. rs140468352[chr12:96607501]
Enhancers that have rs140468352[chr12:96607501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140468352[chr12:96607501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96607495 96607516 IRF1 JASPAR yes 123048252
chr12 96607496 96607511 FOXP1 JASPAR yes 123048253
chr12 96607499 96607519 RREB1 JASPAR yes 123048254
chr12 96607499 96607520 IRF1 JASPAR yes 123048255
chr12 96607500 96607521 IRF1 JASPAR yes 123048256
chr12 96607501 96607516 FOXP1 JASPAR yes 123048257
Genes associated with rs140468352[chr12:96607501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More