EnhancerDB
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  3. rs140470879[chr15:40342202]
Enhancers that have rs140470879[chr15:40342202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140470879[chr15:40342202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40341855 40343296 AR GTRD no Prostate (PC-3) 21649398
chr15 40342194 40342209 TFAP2A JASPAR yes 22923073
chr15 40342197 40342209 TFAP2A JASPAR yes 22923074
chr15 40342197 40342209 TFAP2B JASPAR yes 22923075
chr15 40342197 40342209 TFAP2C JASPAR yes 22923076
chr15 40342202 40342221 PAX5 JASPAR yes 22923077
Genes associated with rs140470879[chr15:40342202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More