EnhancerDB
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  3. rs140477627[chr16:1330007]
Enhancers that have rs140477627[chr16:1330007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs140477627[chr16:1330007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1329836 1331322 TCF7L2 GTRD no Colon (HCT116) 21684408
chr16 1329860 1335538 TCF7L2 GTRD no Colon (HCT116) 21684409
chr16 1329878 1331715 TCF7L2 GTRD no Colon (HCT116) 21684410
chr16 1329913 1331540 TCF7L2 GTRD no Colon (HCT116) 21684411
chr16 1329962 1331541 ZNF143 GTRD no Epithelial (MCF-7) 21684412
chr16 1329984 1331516 ZNF143 GTRD no Epithelial (MCF-7) 21684413
chr16 1329987 1330993 ZNF143 GTRD no Epithelial (MCF-7) 21684414
chr16 1329991 1332722 ZNF143 GTRD no Epithelial (MCF-7) 21684415
Genes associated with rs140477627[chr16:1330007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More