EnhancerDB
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  3. rs140480252[chr17:37909006]
Enhancers that have rs140480252[chr17:37909006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 37904025 37913915 enh4401
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs140480252[chr17:37909006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 37908999 37909009 ID4 JASPAR yes 54172604
chr17 37908999 37909009 TCF4 JASPAR yes 54172605
chr17 37909001 37909006 USF2 TRANSFAC yes 54172606
chr17 37909004 37909014 ZNF740 JASPAR yes 54172607
Genes associated with rs140480252[chr17:37909006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 37782993 37792879 + PPP1R1B ENSG00000131771.9 37782993 116127 Spleen 0.40847 15740