EnhancerDB
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  3. rs140505378[chr17:70410000]
Enhancers that have rs140505378[chr17:70410000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs140505378[chr17:70410000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70409757 70410094 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784822
chr17 70409759 70410119 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784823
chr17 70409805 70410121 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784824
chr17 70409995 70410001 NFIC JASPAR yes 55785188
Genes associated with rs140505378[chr17:70410000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More