EnhancerDB
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  3. rs140541820[chr15:40343117]
Enhancers that have rs140541820[chr15:40343117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140541820[chr15:40343117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40341855 40343296 AR GTRD no Prostate (PC-3) 21649398
chr15 40342295 40343204 ZNF143 GTRD no Epithelial (MCF-7) 21649399
chr15 40342309 40343384 ZNF143 GTRD no Epithelial (MCF-7) 21649400
chr15 40342310 40343211 ZNF143 GTRD no Epithelial (MCF-7) 21649401
chr15 40343099 40343119 RREB1 JASPAR yes 22923343
chr15 40343100 40343666 TCF7L2 GTRD no Colon (HCT116) 21649410
chr15 40343101 40343121 RREB1 JASPAR yes 22923344
chr15 40343106 40343126 RREB1 JASPAR yes 22923345
chr15 40343108 40343128 RREB1 JASPAR yes 22923346
chr15 40343110 40343120 ZNF740 JASPAR yes 22923347
chr15 40343110 40343130 RREB1 JASPAR yes 22923348
chr15 40343112 40343127 RUNX2 JASPAR yes 22923349
Genes associated with rs140541820[chr15:40343117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More