EnhancerDB
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  3. rs140562839[chr1:167236631]
Enhancers that have rs140562839[chr1:167236631]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs140562839[chr1:167236631]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167236625 167236640 FOXP1 JASPAR yes 32855744
chr1 167236625 167236646 IRF1 JASPAR yes 32855745
chr1 167236629 167236643 STAT1 JASPAR yes 32855746
chr1 167236629 167236644 STAT2 JASPAR yes 32855747
chr1 167236629 167236647 IRF2 JASPAR yes 32855748
chr1 167236631 167236652 IRF1 JASPAR yes 32855749
Genes associated with rs140562839[chr1:167236631], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More