EnhancerDB
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  3. rs140584236[chr1:23930098]
Enhancers that have rs140584236[chr1:23930098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs140584236[chr1:23930098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23930090 23930103 NFKB1 JASPAR yes 27446395
chr1 23930092 23930098 ZNF354C JASPAR yes 27446396
chr1 23930095 23930106 USF1 JASPAR yes 27446397
chr1 23930095 23930106 USF2 JASPAR yes 27446398
chr1 23930096 23930106 SREBF2 JASPAR yes 27446399
chr1 23930098 23930103 USF2 TRANSFAC yes 27446400
Genes associated with rs140584236[chr1:23930098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More