EnhancerDB
  1. Home
  2. SNP
  3. rs140602241[chr1:9842329]
Enhancers that have rs140602241[chr1:9842329]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs140602241[chr1:9842329]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9842320 9842330 HOXA2 JASPAR yes 26677537
chr1 9842320 9842330 NOTO JASPAR yes 26677538
chr1 9842329 9842341 FOXC2 JASPAR yes 26677539
Genes associated with rs140602241[chr1:9842329], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More