EnhancerDB
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  3. rs140661562[chr1:52005353]
Enhancers that have rs140661562[chr1:52005353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs140661562[chr1:52005353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52005343 52005357 RORA JASPAR yes 28847562
chr1 52005350 52005371 ZNF263 JASPAR yes 28847563
chr1 52005351 52005355 LFA1 TRANSFAC yes 28847564
Genes associated with rs140661562[chr1:52005353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More