EnhancerDB
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  3. rs140685539[chr18:51789686]
Enhancers that have rs140685539[chr18:51789686]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs140685539[chr18:51789686]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51789575 51789985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822964
chr18 51789614 51789984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822965
chr18 51789671 51789686 FOXP1 JASPAR yes 110713480
chr18 51789678 51789690 FOXI1 JASPAR yes 110713482
chr18 51789678 51789694 SOX4 JASPAR yes 110713483
Genes associated with rs140685539[chr18:51789686], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More