EnhancerDB
  1. Home
  2. SNP
  3. rs140755533[chr1:52427078]
Enhancers that have rs140755533[chr1:52427078]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52426231 52441515 enh26698
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs140755533[chr1:52427078]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52427066 52427082 T JASPAR yes 28878562
chr1 52427071 52427081 FIGLA JASPAR yes 28878563
chr1 52427071 52427081 TCF3 JASPAR yes 28878564
chr1 52427072 52427081 SNAI2 JASPAR yes 28878565
chr1 52427073 52427078 USF2 TRANSFAC yes 28878566
Genes associated with rs140755533[chr1:52427078], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More