EnhancerDB
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  3. rs140800352[chr10:25176654]
Enhancers that have rs140800352[chr10:25176654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr10 25176621 25176794 vista6827
VISTA
Transcript factors that have rs140800352[chr10:25176654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25172473 25177280 ZNF274 GTRD no Bone Marrow (K562) 21422373
chr10 25172473 25177280 ZNF274 GTRD no Bone Marrow (K562) 107904402
chr10 25174218 25177043 TCF7L2 GTRD no Colon (HCT116) 21422374
chr10 25174218 25177043 TCF7L2 GTRD no Colon (HCT116) 107904403
chr10 25176047 25176952 TCF7L2 GTRD no Colon (HCT116) 21422375
chr10 25176047 25176952 TCF7L2 GTRD no Colon (HCT116) 107904404
chr10 25176201 25176774 ZNF274 GTRD no Blood (GM12878) 21422376
chr10 25176201 25176774 ZNF274 GTRD no Blood (GM12878) 107904405
chr10 25176279 25176969 TCF7L2 GTRD no Colon (HCT116) 21422377
chr10 25176279 25176969 TCF7L2 GTRD no Colon (HCT116) 107904406
chr10 25176329 25176742 TCF7L2 GTRD no Colon (HCT116) 21422378
chr10 25176329 25176742 TCF7L2 GTRD no Colon (HCT116) 107904407
chr10 25176343 25176958 ZNF143 GTRD no Epithelial (MCF-7) 21422379
chr10 25176343 25176958 ZNF143 GTRD no Epithelial (MCF-7) 107904408
chr10 25176349 25176991 ZNF143 GTRD no Epithelial (MCF-7) 21422380
chr10 25176349 25176991 ZNF143 GTRD no Epithelial (MCF-7) 107904409
chr10 25176355 25176940 ZNF143 GTRD no Epithelial (MCF-7) 21422381
chr10 25176355 25176940 ZNF143 GTRD no Epithelial (MCF-7) 107904410
chr10 25176356 25176852 ZNF143 GTRD no Epithelial (MCF-7) 21422382
chr10 25176356 25176852 ZNF143 GTRD no Epithelial (MCF-7) 107904411
chr10 25176362 25177099 TCF7L2 GTRD no Colon (HCT116) 21422383
chr10 25176362 25177099 TCF7L2 GTRD no Colon (HCT116) 107904412
chr10 25176383 25176824 ZNF143 GTRD no Epithelial (MCF-7) 21422384
chr10 25176383 25176824 ZNF143 GTRD no Epithelial (MCF-7) 107904413
chr10 25176405 25176997 ZNF143 GTRD no Epithelial (MCF-7) 21422385
chr10 25176405 25176997 ZNF143 GTRD no Epithelial (MCF-7) 107904414
chr10 25176435 25176873 ZNF143 GTRD no Epithelial (MCF-7) 21422386
chr10 25176435 25176873 ZNF143 GTRD no Epithelial (MCF-7) 107904415
chr10 25176436 25176722 ZNF274 GTRD no Bone Marrow (K562) 21422387
chr10 25176436 25176722 ZNF274 GTRD no Bone Marrow (K562) 107904416
chr10 25176446 25176711 ZNF274 GTRD no Liver (HepG2) 107904417
chr10 25176502 25176743 ZNF274 GTRD no Cervix (HeLa-S3) 21422388
chr10 25176502 25176743 ZNF274 GTRD no Cervix (HeLa-S3) 107904418
chr10 25176591 25176871 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422389
chr10 25176591 25176871 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904419
chr10 25176594 25176914 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422390
chr10 25176594 25176914 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904420
chr10 25176603 25176825 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422391
chr10 25176603 25176825 RUNX3 UCSC Txn Factor no Conserved 107904421
chr10 25176603 25176825 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904422
chr10 25176621 25176885 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422392
chr10 25176621 25176885 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904423
chr10 25176636 25176826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21422393
chr10 25176636 25176826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107904424
chr10 25176648 25176661 POU3F3 JASPAR yes 21061642
chr10 25176648 25176661 POU3F3 JASPAR yes 126101075
chr10 25176648 25176662 POU1F1 JASPAR yes 21061643
chr10 25176648 25176662 POU1F1 JASPAR yes 126101076
chr10 25176649 25176661 POU3F2 JASPAR yes 21061644
chr10 25176649 25176661 POU3F2 JASPAR yes 126101077
chr10 25176650 25176655 GATA2 JASPAR yes 21061645
chr10 25176650 25176655 GATA2 JASPAR yes 126101078
Genes associated with rs140800352[chr10:25176654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More