EnhancerDB
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  3. rs140828042[chr17:39818238]
Enhancers that have rs140828042[chr17:39818238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs140828042[chr17:39818238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39818222 39818242 TP53 JASPAR yes 54269826
chr17 39818224 39818244 TP63 JASPAR yes 54269827
chr17 39818225 39818243 TP53 JASPAR yes 54269828
chr17 39818225 39818243 TP63 JASPAR yes 54269829
chr17 39818225 39818243 TP73 JASPAR yes 54269830
chr17 39818226 39818241 TP53 JASPAR yes 54269831
Genes associated with rs140828042[chr17:39818238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More