EnhancerDB
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  3. rs140916820[chr5:171530020]
Enhancers that have rs140916820[chr5:171530020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
chr5 171529769 171530204 vista50119
VISTA
Transcript factors that have rs140916820[chr5:171530020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171529828 171530228 FOS UCSC Txn Factor no Conserved 108537424
chr5 171529887 171530563 STAT1 UCSC Txn Factor no Conserved 108537425
chr5 171529929 171530219 STAT3 UCSC Txn Factor no Conserved 108537426
chr5 171530016 171530030 JUN JASPAR yes 67762711
chr5 171530016 171530030 JUN JASPAR yes 70760340
chr5 171530018 171530029 BATF JASPAR yes 67762712
chr5 171530018 171530029 DUX4 JASPAR yes 67762713
chr5 171530018 171530029 BATF JASPAR yes 70760341
chr5 171530018 171530029 DUX4 JASPAR yes 70760342
chr5 171530020 171530031 FOS JASPAR yes 67762714
chr5 171530020 171530031 JUND JASPAR yes 67762715
chr5 171530020 171530031 FOS JASPAR yes 70760343
chr5 171530020 171530031 JUND JASPAR yes 70760344
Genes associated with rs140916820[chr5:171530020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More